Optimization of Grid Computing for Big Data Processing in Biomedical Research

Devi Rahmah Sope (1), Wolnough Cale (2), M. Anwar Aini (3), Nur Fajrin Maulana Yusuf (4), Masli Nurcahya Zoraida (5)
(1) Universitas Handayani Makassar, Indonesia,
(2) Chernihiv National Technological University, Ukraine,
(3) Universitas Qomaruddin, Indonesia,
(4) Universitas Islam Makassar, Indonesia,
(5) Universitas Islam Makassar, Indonesia

Abstract

The rapid growth of biomedical research has generated massive volumes of data, creating significant computational challenges. Traditional high-performance computing systems struggle to efficiently process, analyze, and manage such large-scale datasets. Grid computing, with its distributed architecture, offers a promising solution by enabling scalable and cost-effective data processing. This study explores the optimization of grid computing frameworks for big data processing in biomedical research, focusing on enhancing computational efficiency, scalability, and fault tolerance. The research aimed to evaluate the performance of optimized grid computing systems in processing diverse biomedical datasets, including genomic, proteomic, and imaging data. A combination of experimental and comparative approaches was employed, integrating grid computing frameworks such as Apache Hadoop and Globus Toolkit with biomedical data pipelines. Key metrics, including processing time, resource utilization, and error rates, were analyzed to assess the system’s performance. The findings demonstrated that optimized grid computing systems reduced processing time by an average of 35% compared to traditional methods while maintaining high accuracy. Scalability tests confirmed the framework’s ability to handle datasets up to 15 times larger without significant performance degradation. Fault tolerance improved through adaptive resource allocation, minimizing workflow interruptions. The study concludes that optimized grid computing is a transformative approach for big data processing in biomedical research. Its ability to enhance computational efficiency and scalability positions it as a crucial tool for addressing the growing data demands of modern biomedical science.

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Authors

Devi Rahmah Sope
devi@handayani.ac.id (Primary Contact)
Wolnough Cale
M. Anwar Aini
Nur Fajrin Maulana Yusuf
Masli Nurcahya Zoraida
Sope, D. R., Cale, W. ., Aini, M. A., Yusuf, N. F. M., & Zoraida, M. N. (2024). Optimization of Grid Computing for Big Data Processing in Biomedical Research. Journal of Computer Science Advancements, 2(6). https://doi.org/10.70177/jsca.v2i6.1619

Article Details

Implementation of Grid Computing in Genomic Data Processing in Biomedical Informatics

Rahmawati Rahmawati, Ammar Al-Momani, Sarah Williams
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